Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888853.1_cds_XP_016443489.1_38638
CDS Infomation

[gene=LOC107768853] [db_xref=GeneID:107768853] [protein=pinin-like] [protein_id=XP_016443489.1] [location=join(44886..44963,45065..45187,45285..45350,45576..45743,45924..46037,46761..46832,47731..47814,47924..48024,48490..48648,48769..49009)] [gbkey=CDS]
Sequence

ATGGCGAGCGCCGTAGTGGAGAAGACGGAGGAAGAGCTCCGCAAAGAACTCTTTGAACTC
AACCGTCAACAACACGAGATAACTGAGCGGCTTAAGGATCCAAGAGGTATTCGCCGCGGT
GGATTCTCTGGTGGCGGCGGTGGCGGTGGTCCTCGGAGTTTTGTTGCCAACGGCGGCCGC
CAACGTGGCCTTGTTAGACCTGCGGAGAGGAATGATGCAGAGGATCAGCCAGCACCTAAA
AGGCGTATTTCTTCAGCTGTTGTGAAGATTGAAGAGGGGGAGATTGCTGACGATGTCTCT
GGAGCTCCAATGGATGCGAATAAGGAAGATTCAGCTGTGGAGGAGGGAAGTTCAAGGGAG
GCACATGTCAGCCAGAATGAGAGAAAGCCATCCAATTGGCTTCGGAGGGATGGCAATCAA
AGACCCTCAAAAATGGATCCTGATTTTCCTCCACCGGAACCTGTGCCGAGAGTGTTGCCA
AAAAACGAGGATCCTAAATTGGTTAGTAGGAATAAGAGAATGTTGGGACAGCTGTTGGGG
ACCTTGGAGAAGTTCCGAAAAGAAGACATGCAGCTTTCAGGGAGCGAGGCTTACATGCGG
AGGTCAGATTCTTTGAAAAGGGCTGAGCAAAGGGCGCGTGAAGAAAGTGAGAGGTTAAGA
CAACAAGAGCGTGAGCAGCGTGATGAAAAGCTGAAAAGAGATCTGACTCTTCGAGCACGT
CTTGCTGCTAAAGCTGAGGAAAAGAGGTTGGAATTGCTGTTTCTTCGGTGGAGTGAGCAC
CATAAAAAACTAGCCAATTTTATAAGGACCAAAGCCGAGCCTCCGATCTTTTATTCTTTT
GCCAAACCATTGGAAGAAGATCCAAACTTAGTTGAGCAGAAAAAAGATCAGGTAAATATC
ACCCTGCACATTGTTGGTTGCATTATAGAAAATTCACTTGTGAAATTGTACACAGCAAAA
TCATTGTGTTTGACGCGGGGGGGNGACAAGGAGCTAGAGAGTCATAGACTTGAGCGTGGA
CCCAAGACTAGAAAGATCCCTGGTGTTAGCAACAATGAAGATGAGGATGTTGAGGATATC
AATGTTGCAGAGGACGATATGATGGATGATGTGCTTGACGTGGATGATAATAACCAGAGG
AGTGATGAAATTGTAAAAGTTGAAGCAGGTAATGGTAGTACACAGATTGATCAGCAGAAG
ATATGA

Peptide Sequence

PEP ID

XP_016443489.1
PEP Infomation

PREDICTED: pinin-like [Nicotiana tabacum]
Sequence

MASAVVEKTEEELRKELFELNRQQHEITERLKDPRGIRRGGFSGGGGGGGPRSFVANGGR
QRGLVRPAERNDAEDQPAPKRRISSAVVKIEEGEIADDVSGAPMDANKEDSAVEEGSSRE
AHVSQNERKPSNWLRRDGNQRPSKMDPDFPPPEPVPRVLPKNEDPKLVSRNKRMLGQLLG
TLEKFRKEDMQLSGSEAYMRRSDSLKRAEQRAREESERLRQQEREQRDEKLKRDLTLRAR
LAAKAEEKRLELLFLRWSEHHKKLANFIRTKAEPPIFYSFAKPLEEDPNLVEQKKDQVNI
TLHIVGCIIENSLVKLYTAKSLCLTRGGDKELESHRLERGPKTRKIPGVSNNEDEDVEDI
NVAEDDMMDDVLDVDDNNQRSDEIVKVEAGNGSTQIDQQKI

Transcript Sequence

Gene sequence data has not been registered.